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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs189373838 chr19:43582784 T/G 0.000256 485 15.32 18.3 10.08 KM Plot
THCA rs189538 chr1:4650303 T/C 0.000314 483 11.28 15 16.13 KM Plot
THCA rs190853816 chr7:16417932 G/A 4.72E-9 485 15.13 17.7 17.77 KM Plot
THCA rs191351001 chr14:59691759 T/G 0 488 15.9 16.4 3.53 KM Plot
THCA rs191686288 chr10:70633047 C/A 1.02E-6 479 15.93 15.32 16.63 KM Plot
THCA rs1919102 chr9:94736561 C/T 2.96E-5 475 16.3 15.27 13.32 KM Plot
THCA rs1919103 chr9:94736589 C/T 1.6E-5 478 16.22 15.27 14.52 KM Plot
THCA rs1921837 chr7:16427707 C/G 3.32E-9 483 15.13 17.83 17.77 KM Plot
THCA rs1923534 chr10:81710485 A/G 0.0002 489 15.97 15.9 13.5 KM Plot
THCA rs192370027 chr1:91800378 C/A 7.89E-6 489 15.65 17.08 17.77 KM Plot
THCA rs192519 chr1:91854389 G/A 0.000101 488 14.63 17.13 15.33 KM Plot
THCA rs1926873 chr1:184016785 A/G 1.0E-5 488 15 17.13 21.65 KM Plot
THCA rs193106899 chr19:43558600 C/A 0.000227 489 15.3 18.93 10.08 KM Plot
THCA rs193213546 chr14:59691746 T/G 0 487 15.9 16.4 3.53 KM Plot
THCA rs1936062 chr1:119117732 A/T 3.64E-5 490 16.23 15.33 14.57 KM Plot